Hi,
I'm not quite sure I understand from the pics which one is the diverted canal and which one is the continuing stream...
If your problem is that the canal is taking in too much gravel, you can use a vortex gravel trap; that is simply a diagonal slot across the canal's bed, to be located in a sector with more or less uniform flow, that will return some flow to the river, with most of the gravel and coarse sand load.
If the problem is gravel depositing around the intake, then I would probably try to install a judiciously-designed baffle upstream of the intake.
Cheers, Claudio
------------------------------
Claudio Meier Ing., M.ASCE
Associate Professor of Civil Engineering
University of Memphis
Memphis TN
(901)678-3158
------------------------------